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STRINGSTRING
Solyc04g005200.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g005200.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g005200.2.1annotation not available (247 aa)    
Predicted Functional Partners:
Solyc04g005190.2.1
annotation not available (1055 aa)
 
   
  0.690
101257479
annotation not available (306 aa)
     
 
  0.579
Solyc05g012520.2.1
Uncharacterized protein; Soluble N-ethylmaleimide-sensitive factor adaptor protein 30 (248 aa)
     
 
  0.579
101265526
annotation not available (343 aa)
     
 
  0.579
LOC778225
Isochorismate synthase (580 aa)
 
   
  0.564
101247015
Uncharacterized protein; enoyl-CoA hydratase/isomerase D; Belongs to the enoyl-CoA hydratase/isomerase family (337 aa)
   
 
  0.560
101257100
MAK16 protein-related; Belongs to the MAK16 family (302 aa)
     
   
  0.540
Solyc04g005180.2.1
annotation not available (309 aa)
 
 
   
  0.529
101248579
Uncharacterized protein; DNA-directed RNA polymerases (231 aa)
           
  0.513
Solyc07g056550.2.1
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Bystin (InterPro-IPR007955); Has 475 Blast hits to 467 proteins in 210 species- Archae - 0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55; Viruses - 0; Other Eukaryotes - 117 (source- NCBI BLink) (398 aa)
     
   
  0.478
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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