STRINGSTRING
Solyc04g005850.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g005850.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g005850.1.1Uncharacterized protein (756 aa)    
Predicted Functional Partners:
Solyc04g072290.2.1
Uncharacterized protein (749 aa)
     
  0.976
Solyc12g056520.1.1
Uncharacterized protein (977 aa)
     
  0.975
Solyc04g071350.2.1
Uncharacterized protein (1106 aa)
     
  0.975
Solyc12g096290.1.1
Uncharacterized protein (765 aa)
     
  0.975
Solyc09g075280.1.1
Uncharacterized protein (804 aa)
     
  0.975
Solyc11g050710.1.1
Uncharacterized protein (770 aa)
     
  0.973
Solyc10g019140.1.1
Uncharacterized protein (505 aa)
     
  0.973
Solyc03g095410.2.1
Uncharacterized protein (830 aa)
     
  0.973
Solyc11g008340.1.1
Uncharacterized protein (1143 aa)
     
  0.959
Solyc12g096370.1.1
Uncharacterized protein (674 aa)
     
  0.951
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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