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STRINGSTRING
Solyc04g007160.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g007160.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g007160.1.1annotation not available (269 aa)    
Predicted Functional Partners:
101257751
Calmodulin-binding protein (638 aa)
     
 
  0.734
101244125
Protein kinase C substrate, heavy chain-related (202 aa)
     
 
  0.734
Solyc06g068700.2.1
annotation not available (532 aa)
     
 
  0.669
CNX61.0
Calnexin-like protein (538 aa)
     
 
  0.669
101250886
Alpha-amylase-like 2; Belongs to the glycosyl hydrolase 13 family (407 aa)
   
   
  0.656
TBG7
Beta-galactosidase (870 aa)
   
   
  0.615
101267848
annotation not available (969 aa)
   
   
  0.611
101259045
Prolyl oligopeptidase family protein (797 aa)
     
   
  0.584
101255294
Uncharacterized protein; Quinolinate phoshoribosyltransferase (353 aa)
           
  0.583
101267007
Uncharacterized protein; N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (350 aa)
           
  0.580
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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