STRINGSTRING
Solyc04g007400.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g007400.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g007400.2.1Uncharacterized protein (261 aa)    
Predicted Functional Partners:
Solyc03g096660.1.1
Uncharacterized protein (195 aa)
   
   
 
0.903
Solyc06g083470.2.1
Uncharacterized protein (269 aa)
   
   
 
0.902
Solyc10g086620.1.1
Uncharacterized protein (273 aa)
   
   
 
0.902
Solyc06g083490.2.1
Uncharacterized protein (185 aa)
   
   
 
0.902
Solyc06g083480.2.1
Uncharacterized protein (129 aa)
   
   
 
0.902
Solyc06g005720.2.1
Uncharacterized protein (301 aa)
   
   
 
0.902
Solyc04g054950.2.1
Uncharacterized protein (263 aa)
   
   
 
0.901
Solyc03g096640.2.1
Uncharacterized protein (268 aa)
   
   
 
0.901
Solyc09g011130.1.1
Uncharacterized protein (263 aa)
   
   
 
0.901
Solyc09g011140.2.1
Uncharacterized protein (270 aa)
   
   
 
0.901
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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