• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc04g007510.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g007510.2.1" - DEA(D/H)-box RNA helicase family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g007510.2.1DEA(D/H)-box RNA helicase family protein (1154 aa)    
Predicted Functional Partners:
101263464
annotation not available (521 aa)
     
 
  0.644
101266117
DEA(D/H)-box RNA helicase family protein; Belongs to the DEAD box helicase family (744 aa)
     
 
  0.644
101245966
RNA helicase; P-loop containing nucleoside triphosphate hydrolases superfamily protein (597 aa)
     
 
  0.605
101260632
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (436 aa)
     
 
  0.590
101258325
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (570 aa)
     
 
  0.590
101255555
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein (585 aa)
     
 
  0.587
DEAD31
DEA(D/H)-box RNA helicase family protein; Belongs to the DEAD box helicase family (439 aa)
     
 
  0.581
Solyc03g119010.2.1
Uncharacterized protein; Modifier of snc1,4 (240 aa)
       
 
  0.581
101261833
annotation not available (2384 aa)
     
 
  0.581
Solyc06g043160.1.1
annotation not available (52 aa)
     
 
  0.581
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (6%) [HD]