STRINGSTRING
Solyc04g008030.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g008030.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g008030.1.1Uncharacterized protein (649 aa)    
Predicted Functional Partners:
Solyc03g025540.2.1
Uncharacterized protein (739 aa)
     
 
0.990
Solyc03g007100.2.1
Uncharacterized protein (1425 aa)
     
  0.958
Solyc02g070240.2.1
Uncharacterized protein (671 aa)
       
  0.955
Solyc02g021760.2.1
Uncharacterized protein (689 aa)
       
  0.955
Solyc04g057990.2.1
Uncharacterized protein (1579 aa)
       
  0.919
Solyc07g005320.2.1
Uncharacterized protein (1380 aa)
     
  0.902
Solyc10g050540.1.1
Uncharacterized protein (741 aa)
     
  0.878
Solyc12g038550.1.1
Uncharacterized protein (271 aa)
     
  0.872
Solyc12g038540.1.1
Uncharacterized protein (65 aa)
     
  0.872
Solyc12g099280.1.1
Uncharacterized protein (1130 aa)
     
  0.872
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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