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Solyc04g008070.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g008070.1.1" - Cyclin family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g008070.1.1Cyclin family protein; Belongs to the cyclin family (641 aa)    
Predicted Functional Partners:
Solyc09g082790.2.1
DNA repair (Rad51) family protein; Belongs to the RecA family (334 aa)
     
 
  0.908
cdkB1
B1-type cyclin dependent kinase ; Belongs to the protein kinase superfamily (303 aa)
     
 
  0.891
101258564
annotation not available (532 aa)
     
 
  0.885
cdc2A-1
Cyclin-dependent protein kinase p34cdc2 ; Belongs to the protein kinase superfamily (294 aa)
     
 
  0.885
101248452
annotation not available (294 aa)
     
 
  0.885
Solyc08g066330.1.1
annotation not available (307 aa)
     
 
  0.885
101257469
DNA-binding HORMA family protein (208 aa)
     
 
  0.881
wee1
Protein kinase WEE1 (510 aa)
     
 
  0.878
101263947
Uncharacterized protein; Homolog of separase (2128 aa)
     
 
  0.863
101258257
Uncharacterized protein; Cyclin J18 (231 aa)
           
  0.852
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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