STRINGSTRING
Solyc04g008110.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g008110.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g008110.2.1Uncharacterized protein (993 aa)    
Predicted Functional Partners:
Solyc01g080540.2.1
Uncharacterized protein (151 aa)
       
  0.998
Solyc05g015610.2.1
Uncharacterized protein (1032 aa)
   
 
0.997
Solyc11g070150.1.1
Uncharacterized protein (137 aa)
       
  0.956
Solyc08g066350.1.1
Uncharacterized protein (136 aa)
       
  0.956
Solyc06g084410.2.1
Uncharacterized protein (120 aa)
       
  0.956
Solyc03g116720.1.1
Uncharacterized protein (115 aa)
       
  0.956
Solyc01g098400.2.1
Uncharacterized protein (148 aa)
       
  0.956
Solyc10g079600.1.1
Uncharacterized protein (227 aa)
 
 
  0.875
Solyc07g047770.2.1
Uncharacterized protein (1235 aa)
   
 
0.852
Solyc02g071220.2.1
Uncharacterized protein (166 aa)
 
 
0.780
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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