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101261013 protein (Solanum lycopersicum) - STRING interaction network
"101261013" - Hydroxyproline-rich glycoprotein family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101261013Hydroxyproline-rich glycoprotein family protein (641 aa)    
Predicted Functional Partners:
101253310
Rubisco methyltransferase family protein (471 aa)
           
  0.885
Solyc05g005620.2.1
Splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein (958 aa)
           
  0.851
101263053
Splicing factor PWI domain-containing protein (921 aa)
     
   
  0.849
101251313
annotation not available (437 aa)
           
  0.764
101255619
annotation not available (437 aa)
           
  0.764
101265663
Uncharacterized protein; YELLOW STRIPE like 1 (663 aa)
           
  0.615
100736439
Temperature-induced lipocalin ; Belongs to the calycin superfamily. Lipocalin family (185 aa)
           
  0.572
100736503
Temperature-induced lipocalin’ ; Belongs to the calycin superfamily. Lipocalin family (185 aa)
           
  0.572
101265634
Uncharacterized protein; Oxidoreductase, 2OG-Fe(II) oxygenase family protein (354 aa)
     
   
  0.570
Solyc04g072390.2.1
Uncharacterized protein; S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (353 aa)
           
  0.568
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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