STRINGSTRING
Solyc04g008490.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g008490.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g008490.1.1Uncharacterized protein (100 aa)    
Predicted Functional Partners:
Solyc12g036790.1.1
Uncharacterized protein (121 aa)
     
  0.997
Solyc01g022750.2.1
Uncharacterized protein (132 aa)
     
  0.991
Solyc01g110390.2.1
Uncharacterized protein (119 aa)
     
    0.991
Solyc09g091170.2.1
Uncharacterized protein (143 aa)
     
  0.989
Solyc06g075810.2.1
Uncharacterized protein (98 aa)
     
  0.983
Solyc02g092270.2.1
Uncharacterized protein (76 aa)
     
  0.982
Solyc08g080240.2.1
Uncharacterized protein (105 aa)
     
    0.981
Solyc07g032420.1.1
Uncharacterized protein (186 aa)
     
  0.980
Solyc09g065830.2.1
Uncharacterized protein (255 aa)
     
    0.975
Solyc09g064450.2.1
Uncharacterized protein (401 aa)
     
  0.973
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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