STRINGSTRING
Solyc04g008670.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g008670.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g008670.1.1Uncharacterized protein (357 aa)    
Predicted Functional Partners:
3OH-1
3b-hydroxylase (374 aa)
   
   
0.919
3OH-2
3b-hydroxylase (355 aa)
   
   
0.917
20ox-3
Gibberellin 20-oxidase-3 (379 aa)
   
   
0.916
20ox-1
Gibberellin 20-oxidase-1 (378 aa)
   
   
0.915
Solyc01g058250.1.1
Uncharacterized protein (348 aa)
   
   
 
0.912
Solyc05g052740.1.1
Uncharacterized protein (349 aa)
   
   
 
0.912
Solyc00g007180.1.1
Annotation not available (349 aa)
   
   
 
0.912
GA20ox4
Gibberellin 20-oxidase 4 (364 aa)
   
   
 
0.911
Solyc09g009110.2.1
Uncharacterized protein (378 aa)
   
   
 
0.911
20ox-2
Gibberellin 20-oxidase-2 (372 aa)
   
   
 
0.911
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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