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101251176 protein (Solanum lycopersicum) - STRING interaction network
"101251176" - ATP/GTP-binding protein family in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101251176ATP/GTP-binding protein family (1363 aa)    
Predicted Functional Partners:
101265062
annotation not available (240 aa)
       
 
  0.938
101252530
annotation not available (206 aa)
       
 
  0.890
101268053
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cytosol, nucleus; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- NUC153 (InterPro-IPR012580); Has 3663 /.../t hits to 21323 proteins in 1057 species- Archae - 109; Bacteria - 2369; Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses - 489; Other Eukaryotes - 13360 (source- NCBI BLink) (768 aa)
     
        0.866
Solyc03g006520.2.1
annotation not available (591 aa)
     
        0.863
101264481
annotation not available (586 aa)
     
        0.863
Solyc07g006820.2.1
annotation not available (1823 aa)
     
        0.832
Solyc06g010200.2.1
annotation not available (1613 aa)
     
        0.822
Solyc06g052040.2.1
Calcium-binding EF hand family protein (160 aa)
       
 
  0.712
101255621
Hydroxyproline-rich glycoprotein family protein (345 aa)
     
      0.674
101261253
Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family (398 aa)
           
  0.619
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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