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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101248664 protein (Solanum lycopersicum) - STRING interaction network
"101248664" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101248664annotation not available (377 aa)    
Predicted Functional Partners:
Solyc11g040390.1.1
annotation not available (819 aa)
 
 
  0.996
101258465
annotation not available (919 aa)
 
 
  0.996
101244777
annotation not available (522 aa)
   
 
  0.996
101260521
annotation not available (519 aa)
   
 
  0.996
101258399
annotation not available (565 aa)
   
 
  0.984
101264180
Glyceraldehyde-3-phosphate dehydrogenase-like family protein (375 aa)
   
 
  0.984
101258686
Semialdehyde dehydrogenase family protein (381 aa)
   
   
  0.982
Solyc11g040380.1.1
annotation not available (115 aa)
 
   
  0.966
LOC543920
Cystathionine gamma synthase (540 aa)
   
 
  0.961
101261961
Mevalonate kinase (392 aa)
     
   
  0.932
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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