STRINGSTRING
Solyc04g008990.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g008990.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g008990.2.1Uncharacterized protein (373 aa)    
Predicted Functional Partners:
Solyc03g116010.1.1
Uncharacterized protein (311 aa)
       
      0.890
Solyc11g073160.1.1
Uncharacterized protein (482 aa)
       
  0.758
Solyc11g010300.1.1
Uncharacterized protein (551 aa)
       
  0.758
ribA
GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone-4-phosphate synthase (552 aa)
       
  0.758
Solyc10g083960.1.1
Uncharacterized protein (498 aa)
   
 
  0.752
Solyc09g008310.2.1
Uncharacterized protein (513 aa)
   
 
  0.752
Solyc04g056540.2.1
Uncharacterized protein (603 aa)
   
   
  0.624
Solyc05g012090.2.1
Dihydropterin pyrophosphokinase-dihydropteroate synthase (512 aa)
         
  0.608
Solyc08g029110.2.1
Uncharacterized protein (291 aa)
     
      0.607
Solyc12g011190.1.1
Uncharacterized protein (293 aa)
       
      0.595
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (17%) [HD]