STRINGSTRING
Solyc04g009350.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g009350.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g009350.2.1Uncharacterized protein (414 aa)    
Predicted Functional Partners:
Solyc07g064810.2.1
Uncharacterized protein (588 aa)
 
  0.993
Solyc09g076020.2.1
Imidazoleglycerol-phosphate dehydratase (288 aa)
 
 
  0.985
Solyc02g071890.2.1
Histidinol dehydrogenase, chloroplastic ; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine (438 aa)
 
  0.969
Solyc11g072520.1.1
Arogenate dehydratase ; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (393 aa)
   
 
  0.963
Solyc11g066890.1.1
Arogenate dehydratase ; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (427 aa)
   
 
  0.963
Solyc06g074530.1.1
Arogenate dehydratase ; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (433 aa)
   
 
  0.963
Solyc02g080620.2.1
Arogenate dehydratase ; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine (400 aa)
   
 
  0.963
Solyc09g011870.1.1
Uncharacterized protein (390 aa)
   
 
  0.961
Solyc07g007590.1.1
Uncharacterized protein (377 aa)
   
 
  0.961
Solyc06g050630.2.1
Uncharacterized protein (272 aa)
   
 
  0.961
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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