STRINGSTRING
Solyc04g012190.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g012190.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g012190.1.1Uncharacterized protein (442 aa)    
Predicted Functional Partners:
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
   
  0.979
Solyc12g007100.1.1
Uncharacterized protein (483 aa)
     
  0.790
Solyc12g044540.1.1
Uncharacterized protein (255 aa)
   
  0.710
Solyc12g099600.1.1
Uncharacterized protein (575 aa)
   
  0.651
Solyc12g096520.1.1
Uncharacterized protein (293 aa)
   
  0.651
Solyc12g096020.1.1
Uncharacterized protein (508 aa)
   
  0.651
Solyc12g089090.1.1
Mitochondrial catalytic protein (519 aa)
   
  0.651
Solyc12g042570.1.1
Uncharacterized protein (334 aa)
   
  0.651
Solyc12g026410.1.1
Uncharacterized protein (301 aa)
   
  0.651
Solyc12g010450.1.1
Uncharacterized protein (316 aa)
   
  0.651
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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