STRINGSTRING
Solyc04g014370.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g014370.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g014370.2.1Uncharacterized protein (221 aa)    
Predicted Functional Partners:
Solyc05g054490.2.1
Uncharacterized protein (310 aa)
     
  0.966
Solyc02g093640.2.1
Uncharacterized protein (320 aa)
     
  0.937
Solyc05g014150.2.1
Uncharacterized protein (210 aa)
     
  0.912
Solyc11g006300.1.1
Uncharacterized protein (272 aa)
         
    0.900
Solyc11g073130.1.1
Uncharacterized protein (215 aa)
         
0.811
Solyc01g105060.2.1
Uncharacterized protein (225 aa)
         
    0.800
Solyc11g011420.1.1
Uncharacterized protein (584 aa)
       
 
  0.495
cdc2A-1
Cyclin-dependent protein kinase p34cdc2 (294 aa)
     
 
  0.456
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
     
   
  0.455
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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