STRINGSTRING
Solyc04g014460.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g014460.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g014460.2.1Uncharacterized protein (272 aa)    
Predicted Functional Partners:
Solyc05g017890.2.1
Uncharacterized protein (1858 aa)
       
  0.994
Solyc08g061000.2.1
Uncharacterized protein (485 aa)
     
  0.972
Solyc06g066060.2.1
Uncharacterized protein (410 aa)
     
  0.972
Solyc07g066060.2.1
Uncharacterized protein (313 aa)
     
  0.967
Solyc10g005530.2.1
Uncharacterized protein (861 aa)
     
  0.966
Solyc01g096600.2.1
Uncharacterized protein (608 aa)
     
  0.962
Solyc04g078830.2.1
Uncharacterized protein (802 aa)
     
  0.952
Solyc06g053590.2.1
Uncharacterized protein (599 aa)
       
  0.938
Solyc04g016240.2.1
Uncharacterized protein (862 aa)
     
  0.937
Solyc03g025540.2.1
Uncharacterized protein (739 aa)
     
    0.933
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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