STRINGSTRING
gts1 protein (Solanum lycopersicum) - STRING interaction network
"gts1" - Putative glutamine synthase in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gts1Putative glutamine synthase (356 aa)    
Predicted Functional Partners:
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
   
 
  0.997
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
   
 
  0.995
nii2
Nitrite reductase (584 aa)
         
  0.957
nii1
Nitrite reductase (587 aa)
         
  0.957
gdh1
Glutamate dehydrogenase (411 aa)
   
 
  0.947
Solyc06g033860.1.1
Glutamate dehydrogenase (411 aa)
   
 
  0.947
Solyc03g094010.2.1
Glutamate dehydrogenase (411 aa)
   
 
  0.947
Solyc01g068210.2.1
Uncharacterized protein (634 aa)
   
 
  0.947
Solyc01g110520.2.1
Uncharacterized protein (577 aa)
   
 
  0.936
Solyc01g088360.2.1
Glutamine phosphoribosylpyrophosphate amidotransferase (551 aa)
   
 
  0.936
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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