STRINGSTRING
Solyc04g015170.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g015170.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g015170.2.1Uncharacterized protein (423 aa)    
Predicted Functional Partners:
Solyc06g053630.2.1
Serine/threonine-protein phosphatase (322 aa)
       
 
  0.929
Solyc06g030490.2.1
Serine/threonine-protein phosphatase (304 aa)
       
 
  0.929
Solyc05g055060.2.1
Serine/threonine-protein phosphatase (325 aa)
       
 
  0.929
Solyc09g008470.2.1
Uncharacterized protein (345 aa)
       
      0.720
Solyc03g044140.2.1
Uncharacterized protein (333 aa)
     
      0.681
Solyc02g092640.2.1
Uncharacterized protein (333 aa)
     
      0.681
Solyc02g064700.2.1
Uncharacterized protein (427 aa)
     
      0.681
Solyc05g018300.2.1
Uncharacterized protein (1080 aa)
       
      0.629
Solyc11g071920.1.1
Serine/threonine-protein phosphatase (995 aa)
     
 
  0.618
BSL1
Hop-interacting protein THI129 (845 aa)
     
 
  0.618
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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