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Solyc04g015440.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g015440.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g015440.2.1Uncharacterized protein; Proton gradient regulation 3 (1098 aa)    
Predicted Functional Partners:
101264726
Thiamine biosynthesis protein ThiC variant L1; Thiamine biosynthesis protein ThiC variant L2; Thiamine biosynthesis protein ThiC variant S (651 aa)
     
   
  0.879
101259028
Protein of unknown function (DUF3464) (185 aa)
     
        0.877
Solyc10g080040.1.1
Uncharacterized protein; LOCATED IN- mitochondrion; BEST Arabidopsis thaliana protein match is- Ribonuclease III family protein (TAIR-AT4G37510.1) (593 aa)
     
        0.873
101257837
annotation not available (342 aa)
     
        0.865
101260010
Uncharacterized protein; RNA-binding CRS1 / YhbY (CRM) domain-containing protein (563 aa)
     
        0.865
101248693
annotation not available (338 aa)
     
        0.865
101251698
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (580 aa)
     
     
0.855
Solyc01g005300.2.1
Uncharacterized protein; Flavin-binding, kelch repeat, f box 1 (607 aa)
     
        0.851
101264428
annotation not available (169 aa)
     
        0.827
101245567
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (839 aa)
     
   
0.798
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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