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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc04g015510.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g015510.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g015510.1.1annotation not available (179 aa)    
Predicted Functional Partners:
101256754
Uncharacterized protein; Pentatricopeptide (PPR) repeat-containing protein (790 aa)
           
  0.694
Solyc10g045310.1.1
Protein of unknown function (DUF3531) (229 aa)
           
  0.634
Solyc11g069240.1.1
annotation not available (449 aa)
           
  0.563
101261125
annotation not available (528 aa)
           
  0.563
Solyc04g008500.2.1
Uncharacterized protein; indeterminate(ID)-domain 5 (517 aa)
           
  0.563
101253219
annotation not available (378 aa)
           
  0.563
101265306
Serine carboxypeptidase-like 51; Belongs to the peptidase S10 family (460 aa)
     
   
  0.450
101248731
annotation not available (493 aa)
           
  0.445
101250621
annotation not available (459 aa)
           
  0.445
Solyc08g006840.2.1
annotation not available (327 aa)
           
  0.441
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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