STRINGSTRING
Solyc04g015570.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g015570.2.1" - Stress-associated protein 13 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g015570.2.1Stress-associated protein 13 (277 aa)    
Predicted Functional Partners:
Solyc08g082970.2.1
Uncharacterized protein (465 aa)
       
      0.667
Solyc08g008510.2.1
Uncharacterized protein (460 aa)
       
      0.667
Solyc06g084440.2.1
Uncharacterized protein (411 aa)
       
      0.636
Solyc09g008610.2.1
Uncharacterized protein (982 aa)
       
      0.607
Solyc05g054100.2.1
Uncharacterized protein (289 aa)
       
      0.607
Solyc01g097740.2.1
Uncharacterized protein (300 aa)
       
      0.607
PSMD1
26S proteasome non-ATPase regulatory subunit 1 homolog A (1004 aa)
       
 
  0.597
Solyc05g053650.2.1
Uncharacterized protein (993 aa)
       
 
  0.597
Solyc04g050520.2.1
Uncharacterized protein (1340 aa)
       
      0.597
Solyc04g050510.2.1
Uncharacterized protein (1314 aa)
       
      0.597
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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