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STRINGSTRING
Solyc04g016010.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g016010.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g016010.2.1annotation not available (537 aa)    
Predicted Functional Partners:
Solyc09g091840.2.1
Uncharacterized protein; Cytosolic glutathione reductase ; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (454 aa)
   
 
  0.990
GR
Uncharacterized protein; Chloroplast glutathione reductase ; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (557 aa)
   
 
  0.990
101260517
Uncharacterized protein; 1-cysteine peroxiredoxin 1 (219 aa)
   
 
  0.971
101260008
Sulfiredoxin (124 aa)
     
 
  0.970
101250263
annotation not available (267 aa)
   
 
  0.969
101256114
annotation not available (267 aa)
   
 
  0.969
101250891
Uncharacterized protein; Chloroplastic NIFS-like cysteine desulfurase (477 aa)
   
 
  0.947
101263926
annotation not available (444 aa)
   
  0.933
Solyc08g008580.2.1
annotation not available (447 aa)
   
  0.933
101243905
Thioredoxin superfamily protein (213 aa)
   
   
  0.925
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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