STRINGSTRING
Solyc04g016370.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g016370.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g016370.2.1Uncharacterized protein (1539 aa)    
Predicted Functional Partners:
Solyc12g037980.1.1
Uncharacterized protein (435 aa)
     
  0.987
Solyc09g089660.2.1
Uncharacterized protein (539 aa)
       
  0.979
Solyc06g043170.2.1
Uncharacterized protein (716 aa)
       
  0.976
Solyc11g069370.1.1
RuvB-like helicase (455 aa)
     
  0.974
Solyc06g062350.2.1
RuvB-like helicase (455 aa)
     
  0.974
Solyc06g007480.2.1
Uncharacterized protein (124 aa)
       
  0.963
Solyc03g032070.2.1
RuvB-like helicase (469 aa)
     
  0.961
Solyc04g009830.2.1
Uncharacterized protein (360 aa)
       
 
  0.948
Solyc01g079210.2.1
Uncharacterized protein (451 aa)
     
 
  0.940
Solyc12g006830.1.1
Histone H2A (135 aa)
       
 
  0.938
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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