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STRINGSTRING
Solyc04g024480.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g024480.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g024480.1.1annotation not available (149 aa)    
Predicted Functional Partners:
Solyc03g115220.2.1
Cytochrome P450 superfamily protein (514 aa)
     
   
  0.643
101249387
annotation not available (226 aa)
           
  0.553
101247221
Uncharacterized protein; NYC1-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family (346 aa)
     
 
  0.548
101257313
Chalcone and stilbene synthase family protein; Belongs to the chalcone/stilbene synthases family (383 aa)
           
  0.548
Solyc01g090600.2.1
annotation not available (358 aa)
           
  0.548
Solyc02g084570.2.1
annotation not available (521 aa)
     
   
  0.521
Solyc12g055820.1.1
annotation not available (527 aa)
           
  0.459
Solyc08g048300.1.1
annotation not available (92 aa)
           
  0.459
ADH2
Alcohol dehydrogenase 2 (384 aa)
           
  0.436
101261114
Uncharacterized protein; Alcohol dehydrogenase 1 (379 aa)
           
  0.436
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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