STRINGSTRING
Solyc04g024590.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g024590.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g024590.2.1Uncharacterized protein (318 aa)    
Predicted Functional Partners:
Solyc05g054490.2.1
Uncharacterized protein (310 aa)
     
 
  0.829
Solyc10g079000.1.1
Uncharacterized protein (194 aa)
       
      0.504
Solyc07g047800.2.1
Uncharacterized protein (266 aa)
 
 
  0.462
SlscADH1
Putative uncharacterized protein (225 aa)
 
 
  0.460
Solyc11g068830.1.1
Uncharacterized protein (477 aa)
              0.459
Solyc03g095840.2.1
Uncharacterized protein (344 aa)
       
      0.435
Solyc03g120470.2.1
MIP (1264 aa)
              0.432
Solyc00g026870.1.1
Annotation not available (465 aa)
              0.430
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
     
   
  0.423
Solyc12g056610.1.1
Uncharacterized protein (246 aa)
 
 
  0.417
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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