STRINGSTRING
Solyc04g025160.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g025160.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g025160.2.1Uncharacterized protein (349 aa)    
Predicted Functional Partners:
Solyc12g017820.1.1
Uncharacterized protein (325 aa)
       
 
  0.946
Solyc08g015990.2.1
Uncharacterized protein (328 aa)
       
 
  0.946
Solyc04g007120.2.1
Uncharacterized protein (409 aa)
       
 
  0.725
Solyc03g117780.2.1
Uncharacterized protein (366 aa)
       
 
  0.725
rad23
RAD23 protein (389 aa)
       
 
  0.725
Solyc02g063130.2.1
Uncharacterized protein (383 aa)
       
 
  0.725
Solyc10g007390.2.1
Uncharacterized protein (475 aa)
     
  0.680
Solyc02g072130.2.1
Uncharacterized protein (475 aa)
     
  0.680
Solyc08g067910.2.1
Uncharacterized protein (341 aa)
       
 
  0.635
Solyc07g054140.2.1
Uncharacterized protein (318 aa)
       
 
  0.635
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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