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Solyc04g025990.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g025990.2.1" - Potassium transporter in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g025990.2.1Potassium transporter ; Potassium transporter (850 aa)    
Predicted Functional Partners:
Solyc04g078640.1.1
Uncharacterized protein (148 aa)
           
  0.483
Solyc01g094290.2.1
Uncharacterized protein (1198 aa)
           
  0.478
PRO2
Delta-1-pyrroline-5-carboxylate synthase Glutamate 5-kinase Gamma-glutamyl phosphate reductase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants (720 aa)
         
  0.441
Solyc06g019170.2.1
Uncharacterized protein (717 aa)
         
  0.441
Solyc10g054050.1.1
Uncharacterized protein (795 aa)
       
 
  0.430
Solyc01g109950.2.1
Uncharacterized protein (873 aa)
       
 
  0.430
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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