STRINGSTRING
Solyc04g026340.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g026340.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g026340.1.1Uncharacterized protein (97 aa)    
Predicted Functional Partners:
Solyc12g014380.1.1
Glucose-6-phosphate isomerase (568 aa)
   
  0.914
GPI
Glucose-6-phosphate isomerase (617 aa)
   
  0.914
Solyc10g038080.1.1
Uncharacterized protein (514 aa)
     
      0.903
LOC543548
Dehydroquinate dehydratase/shikimate-NADP oxidoreductase (545 aa)
     
      0.903
Solyc10g085550.1.1
Enolase (444 aa)
   
   
  0.875
Solyc10g045050.1.1
Uncharacterized protein (107 aa)
   
   
  0.875
PGH1
Enolase (444 aa)
   
   
  0.875
Solyc06g076650.2.1
Uncharacterized protein (473 aa)
   
   
  0.875
Solyc03g114500.2.1
Uncharacterized protein (488 aa)
   
   
  0.875
Solyc10g054870.1.1
Uncharacterized protein (312 aa)
   
 
  0.836
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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