STRINGSTRING
Solyc04g039670.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g039670.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g039670.2.1Uncharacterized protein (421 aa)    
Predicted Functional Partners:
Solyc12g099260.1.1
Uncharacterized protein (608 aa)
  0.999
Solyc01g059880.2.1
Uncharacterized protein (608 aa)
  0.999
LOC543943
Succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial (337 aa)
 
  0.998
SCOA
Succinyl-CoA ligase [ADP-forming] subunit alpha-1, mitochondrial (332 aa)
 
  0.998
Solyc11g017250.1.1
Uncharacterized protein (468 aa)
   
  0.975
Solyc11g007720.1.1
Uncharacterized protein (644 aa)
   
  0.975
Solyc07g006790.2.1
Acetyltransferase component of pyruvate dehydrogenase complex ; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (553 aa)
   
  0.975
Solyc05g009530.2.1
Uncharacterized protein (459 aa)
   
  0.975
Solyc12g011000.1.1
Citrate synthase (514 aa)
   
  0.970
Solyc07g055840.2.1
Citrate synthase (511 aa)
   
  0.970
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (13%) [HD]