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Solyc04g039830.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g039830.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g039830.1.1annotation not available (208 aa)    
Predicted Functional Partners:
LOC543993
Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA (734 aa)
   
 
  0.947
101267921
Uncharacterized protein; Acetyl Co-enzyme a carboxylase biotin carboxylase subunit (536 aa)
   
 
  0.947
101254327
annotation not available (358 aa)
   
   
  0.904
101252846
annotation not available (412 aa)
   
   
  0.877
101245553
annotation not available (412 aa)
   
   
  0.877
101257879
3-hydroxyacyl-CoA dehydrogenase family protein (296 aa)
   
   
  0.838
101243918
Uncharacterized protein; ATP-dependent caseinolytic (Clp) protease/crotonase family protein; Belongs to the enoyl-CoA hydratase/isomerase family (311 aa)
   
   
  0.809
101247015
Uncharacterized protein; enoyl-CoA hydratase/isomerase D; Belongs to the enoyl-CoA hydratase/isomerase family (337 aa)
   
   
  0.674
101263745
Uncharacterized protein; enoyl-CoA hydratase/isomerase A (265 aa)
   
   
  0.674
101253624
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (318 aa)
     
   
  0.651
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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