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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc04g039910.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g039910.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g039910.1.1annotation not available (245 aa)    
Predicted Functional Partners:
101254347
annotation not available (543 aa)
   
 
  0.586
Solyc04g016010.2.1
annotation not available (537 aa)
   
 
  0.586
Solyc09g091840.2.1
Uncharacterized protein; Cytosolic glutathione reductase ; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (454 aa)
     
   
  0.490
GR
Uncharacterized protein; Chloroplast glutathione reductase ; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (557 aa)
     
   
  0.490
101261196
Electron transfer flavoprotein alpha (354 aa)
     
      0.483
101248614
Electron transfer flavoprotein beta (251 aa)
     
      0.483
101250123
Uncharacterized protein; GroES-like zinc-binding alcohol dehydrogenase family protein (384 aa)
   
   
  0.434
Solyc04g039920.1.1
annotation not available (87 aa)
   
          0.411
101265286
ARP protein (REF) (634 aa)
   
   
  0.406
101260797
annotation not available (328 aa)
   
   
  0.403
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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