STRINGSTRING
Solyc04g045590.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g045590.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g045590.2.1Uncharacterized protein (354 aa)    
Predicted Functional Partners:
Solyc10g078930.1.1
Uncharacterized protein (351 aa)
 
            0.636
Solyc04g015080.2.1
Uncharacterized protein (196 aa)
           
  0.495
Solyc04g072390.2.1
Uncharacterized protein (353 aa)
     
   
  0.487
Solyc12g096230.1.1
Uncharacterized protein (342 aa)
           
  0.472
Solyc09g074920.2.1
Uncharacterized protein (259 aa)
           
  0.472
Solyc09g074050.2.1
Uncharacterized protein (549 aa)
           
  0.472
Solyc06g084380.2.1
Uncharacterized protein (510 aa)
           
  0.472
Solyc04g008240.2.1
Uncharacterized protein (641 aa)
           
  0.472
Solyc02g062180.2.1
Uncharacterized protein (643 aa)
           
  0.472
Solyc11g018520.1.1
Uncharacterized protein (240 aa)
   
   
  0.419
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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