STRINGSTRING
MLH1 protein (Solanum lycopersicum) - STRING interaction network
MLH1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLH1MLH1 (728 aa)    
Predicted Functional Partners:
MSH2
Mismatch repair protein ; Component of the post-replicative DNA mismatch repair system (MMR) (943 aa)
 
  0.991
Solyc09g074990.2.1
Uncharacterized protein (142 aa)
     
  0.987
Solyc09g074980.2.1
Uncharacterized protein (796 aa)
   
0.983
Solyc00g017880.1.1
Annotation not available (1083 aa)
 
  0.981
MSH7
Mismatch repair protein (811 aa)
 
  0.981
Solyc01g079520.2.1
Uncharacterized protein ; Component of the post-replicative DNA mismatch repair system (MMR) (1312 aa)
 
  0.980
Solyc02g071530.1.1
Uncharacterized protein (742 aa)
     
  0.975
Solyc03g119070.2.1
Uncharacterized protein (544 aa)
     
  0.974
Solyc10g018530.1.1
Uncharacterized protein (511 aa)
 
  0.974
Solyc08g007330.2.1
Uncharacterized protein (792 aa)
 
  0.974
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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