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Solyc04g047750.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g047750.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g047750.2.1Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Taxilin (InterPro-IPR019132); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (128 aa)    
Predicted Functional Partners:
101244420
Uncharacterized protein; Glutamyl/glutaminyl-tRNA synthetase, class Ic; Belongs to the class-I aminoacyl-tRNA synthetase family (740 aa)
     
 
  0.758
101251979
Uncharacterized protein; glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative; Belongs to the class-I aminoacyl-tRNA synthetase family (790 aa)
     
      0.750
Solyc09g064380.2.1
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (128 aa)
       
      0.747
101253854
Uncharacterized protein; tRNA synthetase class I (I, L, M and V) family protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1182 aa)
       
      0.678
101266244
annotation not available (669 aa)
     
        0.610
101256392
Uncharacterized protein; Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein (778 aa)
     
        0.610
101264939
annotation not available (685 aa)
     
        0.610
101268827
annotation not available (778 aa)
     
        0.610
101055540
Hop-interacting protein THI142 (761 aa)
     
        0.610
101260238
annotation not available (515 aa)
       
 
  0.604
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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