STRINGSTRING
Solyc04g047750.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g047750.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g047750.2.1Uncharacterized protein (128 aa)    
Predicted Functional Partners:
Solyc11g012140.1.1
Uncharacterized protein (1182 aa)
       
      0.581
Solyc05g009220.2.1
Uncharacterized protein (790 aa)
       
      0.581
Solyc01g102410.2.1
Uncharacterized protein (740 aa)
       
      0.581
Solyc12g005580.1.1
Uncharacterized protein (310 aa)
       
  0.531
Solyc10g081850.1.1
Uncharacterized protein (303 aa)
       
  0.531
Solyc06g053760.2.1
Uncharacterized protein (311 aa)
       
  0.531
Solyc01g006950.2.1
Uncharacterized protein (300 aa)
       
  0.531
Solyc10g081580.1.1
Uncharacterized protein (310 aa)
       
  0.522
Solyc10g008570.2.1
Uncharacterized protein (872 aa)
       
  0.522
Solyc07g052470.2.1
Uncharacterized protein (305 aa)
       
  0.522
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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