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STRINGSTRING
101260929 protein (Solanum lycopersicum) - STRING interaction network
"101260929" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101260929annotation not available (1110 aa)    
Predicted Functional Partners:
101260505
Uncharacterized protein; SU(VAR)3-9 homolog 4 (677 aa)
     
 
  0.602
101267211
annotation not available (933 aa)
           
  0.461
Solyc01g006100.2.1
annotation not available (808 aa)
           
  0.461
101267570
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro-IPR003347), F-box domain, Skp2-like (InterPro-IPR022364), Transcription factor jumonji (InterPro-IPR013129); BEST Arabidopsis thaliana protein match is- tra /.../ses, transferring glycosyl groups (TAIR-AT1G78280.1); Has 1762 Blast hits to 1747 proteins in 292 species- Archae - 0; Bacteria - 297; Metazoa - 877; Fungi - 168; Plants - 221; Viruses - 0; Other Eukaryotes - 199 (source- NCBI BLink) (509 aa)
           
  0.439
101263247
annotation not available (93 aa)
       
 
  0.434
Solyc03g112600.2.1
Uncharacterized protein; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (311 aa)
           
  0.430
JMJ524
Uncharacterized protein; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (398 aa)
           
  0.429
101250389
RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) (1119 aa)
           
  0.428
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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