STRINGSTRING
Solyc04g049160.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g049160.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g049160.2.1Uncharacterized protein (508 aa)    
Predicted Functional Partners:
Solyc04g006930.2.1
Uncharacterized protein (800 aa)
     
0.827
Solyc09g009490.2.1
Uncharacterized protein (426 aa)
       
 
  0.800
Solyc07g042460.1.1
Uncharacterized protein (881 aa)
         
    0.800
Solyc12g009630.1.1
Uncharacterized protein (156 aa)
       
  0.756
LOC543942
Regulator of gene silencing (198 aa)
       
  0.756
Solyc11g071750.1.1
Uncharacterized protein (116 aa)
       
  0.756
Solyc11g071740.1.1
Uncharacterized protein (201 aa)
       
  0.756
Solyc06g069740.1.1
Uncharacterized protein (185 aa)
       
  0.756
Solyc04g018110.1.1
Hop-interacting protein THI026 (242 aa)
       
  0.756
Solyc03g115930.1.1
Uncharacterized protein (202 aa)
       
  0.756
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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