STRINGSTRING
Solyc04g049200.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g049200.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g049200.1.1Uncharacterized protein (96 aa)    
Predicted Functional Partners:
Solyc01g094190.2.1
Uncharacterized protein (324 aa)
     
  0.964
Solyc12g098500.1.1
Adenosylhomocysteinase (485 aa)
   
   
  0.937
Solyc09g092390.2.1
Adenosylhomocysteinase (485 aa)
   
   
  0.937
SAHH
Adenosylhomocysteinase ; Adenosylhomocysteine is a competitive inhibitor of S- adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine (485 aa)
   
   
  0.937
Solyc05g032820.1.1
Uncharacterized protein (222 aa)
   
   
  0.937
Solyc10g038080.1.1
Uncharacterized protein (514 aa)
   
 
  0.918
LOC543548
Dehydroquinate dehydratase/shikimate-NADP oxidoreductase (545 aa)
   
 
  0.918
ER69
Ethylene-responsive methionine synthase (765 aa)
   
  0.762
Solyc01g009180.2.1
Uncharacterized protein (817 aa)
   
  0.762
Solyc11g008870.1.1
Methylenetetrahydrofolate reductase (594 aa)
   
 
  0.728
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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