STRINGSTRING
Solyc04g049390.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g049390.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g049390.2.1Uncharacterized protein (310 aa)    
Predicted Functional Partners:
Solyc03g118240.2.1
Uncharacterized protein (327 aa)
   
  0.759
Solyc07g055850.2.1
Uncharacterized protein (323 aa)
     
  0.673
Solyc00g030210.1.1
Annotation not available (1147 aa)
     
 
  0.643
Solyc12g019010.1.1
Uncharacterized protein (256 aa)
   
 
  0.637
Solyc07g007310.2.1
Uncharacterized protein (341 aa)
   
 
  0.637
Solyc07g007300.2.1
Uncharacterized protein (339 aa)
   
 
  0.637
Solyc01g081470.2.1
Uncharacterized protein (292 aa)
   
 
  0.637
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
   
   
  0.576
Solyc06g073290.1.1
Uncharacterized protein (263 aa)
   
        0.542
Solyc07g042150.2.1
Uncharacterized protein (309 aa)
     
 
  0.528
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (11%) [HD]