STRINGSTRING
Solyc04g049530.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g049530.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g049530.1.1Uncharacterized protein (82 aa)    
Predicted Functional Partners:
Solyc01g098350.2.1
Uncharacterized protein (426 aa)
     
  0.949
Solyc02g072510.2.1
Uncharacterized protein (445 aa)
     
      0.902
Solyc10g078180.1.1
Uncharacterized protein (621 aa)
     
  0.773
Solyc09g075760.2.1
Uncharacterized protein (368 aa)
     
  0.773
Solyc07g032480.2.1
Uncharacterized protein (413 aa)
     
  0.773
Solyc04g072880.2.1
Uncharacterized protein (327 aa)
     
  0.767
Solyc01g099310.2.1
Uncharacterized protein (328 aa)
     
  0.767
Solyc06g083260.2.1
Uncharacterized protein (250 aa)
     
  0.736
Solyc12g027850.1.1
Uncharacterized protein (79 aa)
     
  0.536
Solyc12g021280.1.1
Uncharacterized protein (555 aa)
     
  0.506
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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