STRINGSTRING
Solyc04g049770.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g049770.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g049770.2.1Uncharacterized protein (423 aa)    
Predicted Functional Partners:
Solyc08g077420.2.1
Uncharacterized protein (1274 aa)
     
  0.995
Solyc08g007110.2.1
Uncharacterized protein (1264 aa)
     
  0.995
Solyc10g044450.1.1
Uncharacterized protein (481 aa)
     
  0.994
Solyc01g103420.2.1
Uncharacterized protein (496 aa)
     
  0.994
Solyc07g052340.2.1
Uncharacterized protein (884 aa)
     
 
  0.867
Solyc10g018520.1.1
Uncharacterized protein (861 aa)
     
 
  0.865
Y14
RNA-binding protein 8A (195 aa)
       
  0.861
Solyc09g037010.1.1
Uncharacterized protein (205 aa)
     
  0.860
Solyc03g051700.1.1
Uncharacterized protein (199 aa)
     
  0.860
Solyc01g109080.2.1
Uncharacterized protein (3719 aa)
     
  0.860
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (19%) [HD]