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STRINGSTRING
Solyc04g050150.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g050150.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g050150.2.1annotation not available (1217 aa)    
Predicted Functional Partners:
101255831
Uncharacterized protein; Structural maintenance of chromosomes 5 (1050 aa)
   
 
  0.916
101248146
Protein-protein interaction regulator family protein (414 aa)
     
        0.865
Solyc02g081640.2.1
Homeodomain-like superfamily protein (705 aa)
     
      0.864
Solyc03g059420.2.1
Sister chromatid cohesion protein; PHD finger family protein (1620 aa)
     
 
  0.812
Solyc03g059400.1.1
annotation not available (86 aa)
     
 
  0.812
Solyc07g041550.2.1
annotation not available (415 aa)
     
      0.754
Solyc07g041510.1.1
annotation not available (697 aa)
     
      0.754
Solyc06g010200.2.1
annotation not available (1613 aa)
     
   
  0.722
Solyc01g079510.2.1
Uncharacterized protein; WD40/YVTN repeat-like-containing domain;Bromodomain (1667 aa)
     
 
  0.686
Solyc01g060050.1.1
annotation not available (608 aa)
     
 
  0.686
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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