STRINGSTRING
Solyc04g050150.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g050150.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g050150.2.1Uncharacterized protein (1217 aa)    
Predicted Functional Partners:
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
     
  0.976
Solyc02g087710.2.1
Uncharacterized protein (639 aa)
     
  0.950
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
     
  0.910
Solyc08g081410.2.1
Uncharacterized protein (839 aa)
     
      0.908
Solyc02g084490.1.1
Uncharacterized protein (433 aa)
     
      0.908
Solyc02g075610.2.1
Uncharacterized protein (363 aa)
     
      0.908
Solyc11g040180.1.1
Uncharacterized protein (542 aa)
     
      0.872
Solyc09g065010.2.1
Uncharacterized protein (624 aa)
     
      0.872
Solyc09g011930.2.1
Uncharacterized protein (677 aa)
     
      0.872
Solyc02g044050.1.1
Uncharacterized protein (491 aa)
   
  0.839
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (11%) [HD]