STRINGSTRING
Solyc04g050240.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g050240.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g050240.2.1Uncharacterized protein (301 aa)    
Predicted Functional Partners:
Solyc03g113020.2.1
Vacuolar protein sorting-associated protein 29 (189 aa)
     
  0.994
Solyc12g089340.1.1
Vacuolar protein sorting-associated protein 35 ; Plays a role in vesicular protein sorting (791 aa)
     
  0.985
Solyc03g033400.2.1
Vacuolar protein sorting-associated protein 35 ; Plays a role in vesicular protein sorting (790 aa)
     
  0.985
Solyc02g083560.2.1
Vacuolar protein sorting-associated protein 35 ; Plays a role in vesicular protein sorting (790 aa)
     
  0.985
Solyc09g031600.2.1
Uncharacterized protein (473 aa)
     
  0.972
Solyc06g050550.2.1
Uncharacterized protein (541 aa)
     
  0.972
Solyc04g072060.2.1
Uncharacterized protein (204 aa)
     
 
  0.759
Solyc04g051680.2.1
Uncharacterized protein (219 aa)
     
 
  0.759
Solyc03g120750.2.1
Uncharacterized protein (205 aa)
     
 
  0.759
Solyc01g109520.2.1
Uncharacterized protein (206 aa)
     
 
  0.759
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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