STRINGSTRING
Solyc04g050380.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g050380.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g050380.1.1Uncharacterized protein (142 aa)    
Predicted Functional Partners:
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
   
  0.999
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
   
  0.999
Solyc06g071720.1.1
Uncharacterized protein (148 aa)
 
  0.998
Solyc03g112360.1.1
Uncharacterized protein (148 aa)
 
  0.998
Solyc11g068420.1.1
Ribosomal protein (216 aa)
   
  0.998
Solyc06g074300.2.1
Ribosomal protein (216 aa)
   
  0.998
Solyc01g009520.2.1
Ribosomal protein (216 aa)
   
  0.998
Solyc09g091520.1.1
60S acidic ribosomal protein P0 ; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (320 aa)
   
  0.998
Solyc06g076870.2.1
60S acidic ribosomal protein P0 ; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (318 aa)
   
  0.998
Solyc05g054580.2.1
60S acidic ribosomal protein P0 ; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (321 aa)
   
  0.998
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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