STRINGSTRING
Solyc04g050520.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g050520.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g050520.2.1Uncharacterized protein (1340 aa)    
Predicted Functional Partners:
Solyc11g028100.1.1
Uncharacterized protein (414 aa)
     
 
  0.918
Solyc06g011280.2.1
Uncharacterized protein (413 aa)
     
 
  0.918
Solyc03g121310.2.1
Uncharacterized protein (246 aa)
       
 
  0.857
Solyc11g045010.1.1
Uncharacterized protein (91 aa)
     
 
  0.792
Solyc11g045000.1.1
Uncharacterized protein (315 aa)
     
 
  0.792
Solyc11g044990.1.1
Uncharacterized protein (119 aa)
     
 
  0.792
Solyc11g044980.1.1
Uncharacterized protein (109 aa)
     
 
  0.792
Solyc11g044960.1.1
Uncharacterized protein (377 aa)
     
 
  0.792
Solyc11g044950.1.1
Uncharacterized protein (130 aa)
     
 
  0.792
Solyc03g119280.2.1
Uncharacterized protein (504 aa)
     
 
  0.717
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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