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STRINGSTRING
101246046 protein (Solanum lycopersicum) - STRING interaction network
"101246046" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101246046Uncharacterized protein; Plastid transcriptionally active 3 (891 aa)    
Predicted Functional Partners:
101055518
Hop-interacting protein THI030 (528 aa)
     
 
  0.934
101262199
Uncharacterized protein; Plastid transcriptionally active 2 (860 aa)
     
 
0.898
CIP5
CONSTANS interacting protein 5 (683 aa)
     
   
  0.890
101260563
Uncharacterized protein; Plastid transcriptionally active 13 (337 aa)
     
 
  0.862
101251698
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (580 aa)
     
      0.827
101254358
Uncharacterized protein; Ortholog of maize chloroplast splicing factor CRS1 (802 aa)
     
   
  0.799
101249346
Uncharacterized protein; Plastid transcriptionally active 6 (335 aa)
     
 
  0.733
Solyc08g081560.1.1
Uncharacterized protein; RNA polymerase subunit alpha (112 aa)
       
 
  0.691
3950450
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (266 aa)
       
 
  0.685
MFP1
MAR-binding filament-like protein 1; Binds DNA. Interacts with chromatin via matrix attachment regions (MARs). Likely to participate in nuclear architecture by connecting chromatin with the nuclear matrix and potentially with the nuclear envelope (717 aa)
     
   
  0.665
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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