STRINGSTRING
Solyc04g050820.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g050820.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g050820.1.1Uncharacterized protein (296 aa)    
Predicted Functional Partners:
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
     
 
  0.716
Solyc08g081340.2.1
Uncharacterized protein (768 aa)
       
      0.621
Solyc12g056120.1.1
6-phosphogluconate dehydrogenase, decarboxylating ; Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH (496 aa)
     
 
  0.609
Solyc12g040580.1.1
Uncharacterized protein (138 aa)
     
 
  0.609
Solyc12g040570.1.1
Uncharacterized protein (215 aa)
     
 
  0.609
Solyc05g010260.2.1
Uncharacterized protein (271 aa)
     
 
  0.609
Solyc04g005160.1.1
6-phosphogluconate dehydrogenase, decarboxylating ; Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH (471 aa)
     
 
  0.609
IMP3
Inositol monophosphatase 3 ; Responsible for the provision of inositol required for synthesis of phosphatidylinositol and polyphosphoinositides (268 aa)
       
  0.600
IMP1
Inositol monophosphatase 1 ; Responsible for the provision of inositol required for synthesis of phosphatidylinositol and polyphosphoinositides (273 aa)
       
  0.600
IMP2
Inositol monophosphatase 2 ; Responsible for the provision of inositol required for synthesis of phosphatidylinositol and polyphosphoinositides (265 aa)
       
  0.600
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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