STRINGSTRING
Solyc04g051410.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g051410.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g051410.2.1Uncharacterized protein (466 aa)    
Predicted Functional Partners:
Solyc11g011900.1.1
Uncharacterized protein (284 aa)
       
  0.935
Solyc11g005670.1.1
Ubiquitin (534 aa)
       
  0.935
Solyc11g005650.1.1
Uncharacterized protein (113 aa)
       
  0.935
Solyc11g005640.1.1
Uncharacterized protein (222 aa)
       
  0.935
Solyc10g006480.1.1
Ubiquitin (457 aa)
       
  0.935
Solyc10g005560.2.1
Ubiquitin (154 aa)
       
  0.935
Solyc08g082480.2.1
Uncharacterized protein (583 aa)
       
  0.935
Solyc07g064130.1.1
Ubiquitin (457 aa)
       
  0.935
Solyc07g052500.1.1
Uncharacterized protein (258 aa)
       
  0.935
Solyc05g050590.2.1
Uncharacterized protein (568 aa)
       
  0.935
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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