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STRINGSTRING
101258647 protein (Solanum lycopersicum) - STRING interaction network
"101258647" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101258647Uncharacterized protein; RAB GTPase homolog 7A (219 aa)    
Predicted Functional Partners:
101256369
SAND family protein (617 aa)
     
 
  0.949
101255601
Vacuolar protein sorting 11 (954 aa)
     
 
  0.912
101250423
Uncharacterized protein; Vacuoleless1 (VCL1) (843 aa)
       
 
  0.909
Solyc06g005080.2.1
Uncharacterized protein; Zinc ion binding (1067 aa)
       
 
  0.909
101252654
annotation not available (510 aa)
       
 
  0.881
101256240
Rab escort protein (552 aa)
     
 
  0.873
101265892
annotation not available (957 aa)
     
 
  0.862
tVPS41
Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic (960 aa)
     
 
  0.862
101259410
annotation not available (444 aa)
     
 
  0.845
101261051
annotation not available (444 aa)
     
 
  0.845
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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